Chemistry, computation and discovery

Dr A.D. Dinga Wonanke

Founder of StructSub · Computational Chemist · Scientific AI Consultant · Research Software Developer

I use quantum chemistry to understand molecules and materials, machine learning to predict their behaviour, and software engineering to make these methods useful to other researchers.

Dr. A.D. Dinga Wonanke
Dr A.D. Dinga Wonanke

What I Do

I like to make life easier for chemists.

My research starts with understanding why chemical processes occur. I combine quantum-mechanical modelling with machine learning to investigate molecular behaviour, materials synthesis and the relationships hidden in scientific data.

I also build software that helps researchers design, simulate and analyse chemical systems, with less time spent on repetitive tasks.

Scientific Problems That Interest Me

Making materials synthesis more predictable

Understanding relationships between material structures, precursors, experimental conditions and synthesis outcomes.

Related work

Turning scientific literature into useful knowledge

Extracting and organising chemical information from publications to support data-driven research.

Related work

Understanding molecules and materials

Using computation to explain chemical interactions, predict properties and investigate structure–property relationships.

Related work

Building more intelligent scientific workflows

Connecting computational models, scientific databases, automated tools and AI systems.

Related work

Reducing barriers to computational chemistry

Developing software that allows more researchers to benefit from advanced computational methods.

Related work

My Research Vision

I want to help connect molecular structure, synthesis, characterisation and performance in reproducible research workflows. Predictive synthesis, intelligent scientific systems and accessible software are the directions I am working towards.

Read about my research vision

Featured Scientific Work

All projects
MOF structure illustration used by mofstructure

Open-source software

mofstructure

Python tools for analysing and manipulating metal-organic frameworks and other porous materials.

Existing ChemInteraction interface

Scientific web application

ChemInteraction

Explore ligand, metal salt and solvent combinations used in MOF synthesis, with linked FAIR-MOFs records.

FAIR-MOFs scientific project illustration

Scientific data

FAIR-MOFs

Curated crystal structures, material descriptors and synthesis information for computational materials research.

Molecular cage structures and symmetry-unique isomers

Open-source software

cage_isomer_builder

Open-source software for constructing molecular cages, enumerating isomers and describing structural characteristics.

Scientific Consulting

I support researchers, startups and R&D teams with molecular modelling, scientific AI, materials data and custom research software. Together, we define the scientific question and develop a practical, validated approach.

Explore Consulting Services

Building StructSub

I founded StructSub to bring materials design, simulation and analysis into a connected scientific workspace. It grows from a recurring frustration in my own research: too much time spent moving between disconnected tools.

Explore StructSub · Why I founded it
Existing StructSub scientific workspace illustration

Recognition and Scientific Community

Dinga Wonanke holding his Marie Skłodowska-Curie award

Falling Walls / Berlin

My Falling Walls Pitch

A pitch about hydrogen storage in metal-organic frameworks.

Watch on YouTube

Latest updates

All news

FAQ

Frequently asked questions

Short answers about working with me, StructSub and my research. If your question is not here, get in touch.

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Working together

What kinds of projects do you take on?

Chemistry and materials problems that need computational modelling, scientific AI or research software. Typical examples are explaining why a material behaves as it does, screening candidates before synthesis, predicting plausible synthesis conditions, and turning a research workflow into reliable, documented software. The consulting services describe each area.

How does a consulting engagement start?

With a short conversation about the scientific problem, your data and your constraints. I then assess which computational, AI or software methods fit, and we agree on scope, deliverables, milestones and timeline before any work begins. An engagement can be a focused technical review, a research and development project, or a software and AI implementation.

Can you work under a confidentiality agreement?

Yes. Confidentiality, data handling, intellectual property and deliverables are agreed before work begins. Please keep confidential details out of a first enquiry; a brief overview is enough to start.

Is your consulting connected to Nottingham Trent University or StructSub?

No. My independent consulting is separate from my academic appointment at Nottingham Trent University and from my role as founder of StructSub Ltd. It does not imply sponsorship or endorsement by either.

How can experimental chemists collaborate with you?

Bring an experimental challenge and we turn it into a testable computational question. That might mean proposing synthesis conditions, checking structures against powder X-ray diffraction (PXRD), predicting properties or explaining an unexpected result.

StructSub

What is StructSub?

StructSub Ltd is the company I founded to build a browser-based scientific workspace for materials design, simulation and analysis. It brings structure building, modification, simulation and analysis into one place, so researchers spend less time writing scripts and moving between disconnected tools. Visit StructSub.

Why did you found StructSub?

It grew from a recurring frustration in my own research: hours spent writing one-off scripts and moving structures between tools before any science could happen. Researchers should be able to modify molecules and materials without that overhead. Read the full story.

Research

What problem motivates your research?

Many promising materials never reach practical use because the knowledge of how to make them is fragmented, poorly documented or hard to reproduce. I work to make synthesis knowledge explicit, computable and transferable, so researchers can reproduce materials with fewer trial-and-error experiments and a clearer path to scale-up.

What is synthesis prediction?

Synthesis prediction uses AI and, where relevant, physics-based chemistry to estimate how to make a target material: reagents, solvents, temperature, reaction time, pH, modulators and processing steps. My focus is structure-to-synthesis, which starts from a 3D structure, such as a CIF file, and predicts plausible conditions for making it.

How reliable are synthesis predictions?

They are probabilistic, not definitive, and they do not replace chemical intuition. Their value is in narrowing the experimental search: suggesting plausible conditions and flagging constraints or likely failure modes before time and materials are spent in the lab.

Why does synthesis prediction matter outside academia?

Less trial and error means shorter development timelines and lower costs when a new material moves towards industrial production and scale-up.

Can I predict synthesis conditions for my own structure?

For metal–organic frameworks, yes. My open-source package fairmofsyncondition generates a synthesis-condition report from a CIF file. Install it with pip install fairmofsyncondition, then run fairmofsyncondition_syncon my_mof.cif -o my_mof_report.txt.

Methods and software

Which materials do you work on?

Mainly porous materials, including metal–organic frameworks (MOFs), covalent organic frameworks (COFs) and molecular cages, for gas storage, CO₂ capture, separations, chemical sensors and battery applications.

Which computational methods do you use?

Density functional theory (DFT) for stability, geometry, reactivity and electronic structure, including band structures and projected density of states. Binding energy calculations to assess how strongly guest molecules interact with a material, for example in chemical sensors. Energy decomposition analysis (EDA) to understand the interactions within a system by separating them into physical contributions, such as electrostatics, dispersion and charge transfer. Atoms-in-Molecules (AIM) analysis for charge and bonding, for example to locate redox-active sites. Grand canonical Monte Carlo (GCMC) for gas adsorption, such as CO₂ and hydrogen uptake in porous frameworks. Molecular dynamics for ion migration and diffusivity in battery materials. Graph neural networks that learn structure–property relationships across large materials databases.

Do you release open-source software and data?

Yes. My tools include mofstructure for analysing porous frameworks, cage_isomer_builder for molecular cages, and the FAIR-MOFs dataset. I build them with tests, documentation and reproducible workflows. See all tools.

Contact

Let’s work on a scientific problem

I welcome opportunities to collaborate on scientific research, develop intelligent computational tools and support organisations facing challenging scientific problems.

dingawonanke@structsub.com
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